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picture1_Pairwise Sequence Alignment Slideshare 68136 | Lesson4 3 Alignments Blast Beyond


picture2_Pairwise Sequence Alignment Slideshare 68136 | Lesson4 3 Alignments Blast Beyond picture3_Pairwise Sequence Alignment Slideshare 68136 | Lesson4 3 Alignments Blast Beyond

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File: Pairwise Sequence Alignment Slideshare 68136 | Lesson4 3 Alignments Blast Beyond
Finds seeds and extend: Blast HEURISTICS FOR EFFICIENT COMPUTATION OF NEAR-OPTIMAL ALIGNMENTS 08/28/2022 2 Alignment method needs to fit the problem, part 1 Problem Features Method Example of program Pairwise ...

icon picture PPTX Filetype Power Point PPTX | Posted on 28 Aug 2022 | 2 years ago

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...Finds seeds and extend blast heuristics for efficient computation of near optimal alignments alignment method needs to fit the problem part features example program pairwise moderate size dynamic needleman wunsch proteins or genes hundreds letters programming find needle in similar throughout global emboss galaxy smith waterman water subsequences local a match between query sequence could heuristic approach family be hits programs fasta database has m ncbi entries is more blat ucsc genome that nucleotides browser large can billion but engineered very fast align short reads s million employ bowtie bwa both best burroughs wheeler implemented an assembled transform algorithms rapid like do not examine all possible paths are much faster than rigorous algorithm because they only portion potential produce results quality many cases ideal searching databases sequences aligning long basics first scans words strings amino acids score at least t when aligned with some word pairs typically signif...
								

							

						
	
												
				
					
					
					
			
					
				
				
		
	

	
		





	

	
				

						

						
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										Category:  Uncategorized / Uncategorized 
										
Posted on: 28 Aug 2022 | 2 years ago
										
										
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																								alignments,
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Filetype: PPTX
										
File size: 1.59 MB
										
Views: 136x
										
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										Wan learn
											

												Wan learn