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picture1_Pyrosequencing Slideshare 66776 | Saahpc12 Talk


picture2_Pyrosequencing Slideshare 66776 | Saahpc12 Talk picture3_Pyrosequencing Slideshare 66776 | Saahpc12 Talk

 93x       Filetype PPTX       File size 0.65 MB       Source: cse.sc.edu


File: Pyrosequencing Slideshare 66776 | Saahpc12 Talk
Agenda • Background • Needleman-Wunsch • GPU Implementation • Optimization steps • Results Symposium on Application Accelerators in High-Performance Computing 2 Roche 454 GS FLX Titanium XL+ Typical Throughput 700 ...

icon picture PPTX Filetype Power Point PPTX | Posted on 27 Aug 2022 | 2 years ago
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...Agenda background needleman wunsch gpu implementation optimization steps results symposium on application accelerators in high performance computing roche gs flx titanium xl typical throughput mb run time hours read length up to bp reads per shotgun from genomics metagenomics why ampliconnoise pyrosequencing has no consensus sequences overestimation of the number operational taxonomic units otus c quince a lanzn t curtis r davenport n hall i head l and w sloan accurate determination microbial diversity data nature methods vol pp seqdist clustering method merge with minor differences how define distance between two potential pairwise short sequence alignment g computation...
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